TABLE 1

Details of genome assemblies and their base changes compared with previously submitted reference genomes

Serotype and strainNo. of readsGenome coverage (×)Position on genome coveredComparison to previously submitted reference genomes
Reference GenBank accession no. (release/modification date) (reference no.)No. of base changes/substitutions
DENV1 Hawaii18,0153851–10701KM204119 (2016) (9)36
DENV2 1668133,1386991–10688M84727 (1993) (10)67
U87411 (1997) (11)9
KU725663 (2016) (12)10
DENV2 NGC6,5461391–10688M29095 (1993) (13)14
AF038403 (1998) (14)11/1 (delete)a
KM204118 (2016) (9)6
DENV3 H8722,94748512–10661M93130 (1996) (15)36
KU050695 (2016) (9)7
DENV4 H24126,9585781–10621AY947539 (2005)b13/1 (insert)a
KR011349 (2016) (9)16
  • a Deletions and insertions were found in the untranslated region (UTR).

  • b Direct submission by the Dengue Unit, Novartis Institute for Tropical Diseases, Singapore.