TABLE 1

Accession numbers, genome assembly metrics, and sources for the 38 S. marcescens isolatesa

IsolateAccession no.k-mer sizeNo. of contigsN50 valueG+C content (%)Genome size (bp)Coverage (×)No. of genesSource
EL1bCP0277967725,201,69159.465,240,5887764,887S. siderea
EL116bPXZP000000005161,493,21259.475,254,956874,958A. palmata
EL119bPXZQ000000007734,696,49359.455,250,7067124,895A. palmata
EL41bPXZR000000005171,445,00559.465,263,255814,998Wastewater influent
EL60bPXZS000000005112621,93759.455,223,2993174,957A. palmata
KS10bCP0277987725,199,45959.455,238,3371524,882C. abbreviata
EL3RCEP000000002930043,06159.345,261,854205,110S. siderea
EL6RCEO000000003338628,04659.435,272,664205,146S. siderea
EL84RCEN000000002522151,50059.465,178,755175,037C. abbreviata
EL85RCEM000000002731939,73959.415,216,376195,133C. abbreviata
EL95RCEL000000002546924,41459.395,160,448185,238A. palmata
EL96RCEK000000002357618,06959.325,209,705195,321A. palmata
EL97RCEJ000000002573713,34259.255,163,374225,439A. palmata
EL98RCEI000000002954919,34659.425,177,503245,294A. palmata
EL108RCEG000000004535681,03359.465,226,639394,912S. bournoni
EL109RCEH000000002742426,18259.365,274,065225,209S. bournoni
EL110RCEF000000003127439,15259.435,217,630245,075S. bournoni
EL113RCEE000000002525152,63159.455,193,348195,064A. palmata
EL114RCED000000003123047,28159.455,195,401195,054A. palmata
EL115RCEC000000002729342,43359.385,342,905225,108A. palmata
EL117RCEB000000002752420,60059.345,169,891195,302A. palmata
EL118RCEA000000002355218,97359.305,162,774205,292A. palmata
EL120RCDZ000000002352222,38359.315,228,290215,292A. palmata
EL121RCDY000000002349720,43459.315,224,848185,264A. palmata
EL122RCDX000000002354619,55359.335,210,136205,285A. palmata
KS1RCDW000000003150920,96559.435,176,180295,247C. abbreviata
KS5RCDV000000002949320,74959.415,189,506255,266C. abbreviata
KS9RCDU000000002537229,26459.405,165,351195,152C. abbreviata
KS12RCDT000000003129939,02859.295,312,456215,107C. abbreviata
KS16RCDS000000003526242,60459.465,193,145245,037C. abbreviata
KS23RCDR000000003119457,50259.605,172,913224,921C. abbreviata
KS25RCDQ000000002921351,51059.465,207,877215,050C. abbreviata
KS40RCDP000000002946822,92659.445,226,754255,236C. abbreviata
KS45RCDO000000002917734,53959.385,267,350225,011C. abbreviata
KS65RCDN000000003330136,30459.435,211,114255,095C. abbreviata
WWI31RCDM000000002732434,86659.865,127,259165,009Wastewater influent
PDL100cRCDL000000002749422,12759.204,963,330155,089A. palmata
ATCC 13880dRWJO000000003366113,68859.545,044,366315,238Pond water
  • a All isolates, except the ATCC isolate, were collected in the Florida Keys National Marine Sanctuary (USA).

  • b Hybrid assemblies.

  • c Deposited to ATCC in 2002.

  • d Deposited to ATCC in 1961.