TABLE 1

Livestock-associated methicillin-resistant Staphylococcus aureus spa type t899 isolates

Isolate IDaIsolate sourceSample originbYear of isolationSTcNo. of raw readsGenome coverage (×)No. of contigsN50 (bp)dGC content (%)dGenome size (bp)GenBank accession no.
SAV0154PorkCZ20134034772,05264.3417839,11232.912,781,027QYAY00000000
SAV0987HumanCZ20173981,109,01292.4219637,83032.792,922,579QYAX00000000
SAV1035Poultry meatPO201791,062,67088.5612385,31232.712,783,450QYAW00000000
SAV1109Poultry meatPO2017398699,93458.3330320,03032.822,857,636QYAV00000000
SAV1146Poultry meatDE2017398675,51256.2913155,18032.852,896,873QYAU00000000
SAV1149Poultry meatDE20179893,06074.4227721,66032.792,749,354QYAT00000000
SAV1150Poultry meatDE20179808,17067.359978,51132.752,756,154QYAS00000000
SAV1158Poultry meatDE201791,231,020102.5864135,73232.732,764,912QYAR00000000
SAV1228PorkCZ201792,321,580193.4711680,79732.712,730,307QYAQ00000000
  • aID, identification.

  • bCZ, Czech Republic; DE, Germany; PO, Poland.

  • cST, sequence type.

  • dN50 value and GC percentage were calculated based on contigs of ≥500 bp.