TABLE 1

H5N1 HPAI viral genome information by clinical specimen or organ

ParameterLungTracheaColonFeces
Avg read length (bp)241.98309.01241.93220.71
No. of total reads116,464165,494210,112123,005
No. of mapped reads114,713163,740206,998120,715
% of mapped reads98.5098.9498.5298.14
Coverage level
    PB21,921.383,548.503,539.181,923.36
    PB12,314.264,231.174,019.372,581.20
    PA2,131.533,562.353,818.512,192.57
    HA466.531,398.661,796.841,549.18
    NP1,503.163,317.793,151.901,615.38
    NA2,816.063,820.494,009.57897.39
    M3,154.455,908.405,804.053,269.52
    NS3,348.566,310.875,400.611,928.98
    Avg2,206.994,012.283,942.501,994.70