TABLE 1

List of V. cholerae strains sequenced in this study

StrainaLocationSourceYr of isolationType VI killing activitybNCBI accession no.
1496-86United States (LA)Moore swab1986MIPC00000000
2523-87United States (LA)Moore swab1974+MIPE00000000
VC48United States (FL)Oyster1981+MIOT00000000
2633-78BrazilSewage1978+MIPH00000000
857BangladeshWater1996+MIKH00000000
3272-78United States (MD)Water1977+MIOZ00000000
TPUnited States (CA)Water2000+MIPK00000000
2559-78United States (LA)Crab1978+MIOW00000000
HE46Haiti (center)Gray water2011+MIPM00000000
2479-86United States (LA)Moore swab1986+MIPB00000000
2497-86United States (LA)Moore swab1987+MIPD00000000
2512-86United States (LA)Moore swab1986+MIOY00000000
2631-78United States (LA)Moore swab1978+MIOX00000000
VC22United States (FL)Oyster1981+MIKK00000000
VC53United States (AL)Oyster2009+MIOU00000000
VC56United States (AL)Oyster2009+MIOV00000000
3568-07MexicoQueso fresco2007+MIPL00000000
1074-78BrazilSewage1978+MIPG00000000
3223-74GuamStorm drain1974+MIZG00000000
3225-74GuamStorm drain1974+MIPF00000000
2740-80United States (Gulf Coast)Water1980+MIKI00000000
692-79United States (LA)Water1979+MIPA00000000
SIOUnited States (CA)Water2000+MIPJ00000000
C6706PeruPatient1991MIPI00000000
MZO-2BangladeshPatient2001MIKJ00000000
V52SudanPatient1968+MIPN00000000
  • a Strains were isolated from an environmental source, except strains C6706, MZO-2, and V52.

  • b Presence (+) or absence (−) of constitutive type VI killing activity.