TABLE 1

Listing of Francisella isolate genomes released to NCBI as listed in the SMPR by the Association of Analytical Communities

Organism namePanelaAOAC namebGenBank accession no.QualitycAssembly size (bp)No. of plasmids
F. tularensis subsp. tularensis
    WY96IFT9CP010103Finished2,047,0331
    Schu_S4IFT4CP010290Finished1,892,7890
    SchermIFT8CP010287Finished1,890,9220
    NIH B-38IFT1CP010115Finished1,862,4440
F. tularensis subsp. novicida
    U112EFTNN9CP009633Finished1,910,5920
    F6168EFTNN8CP009352CP009353Finished1,927,2401
    D9876EFTNN7CP009607Finished1,870,2060
F. tularensis subsp. holartica
    VT68IFT6CP010288Finished1,893,7330
    LVSIFT2CP009694Finished1,892,1770
    JAPIFT5JUJU00000000IHQD (2)1,907,1590
    FTT_1IFT3CP009693Finished1,892,7580
    425IFT7CP010289Finished1,894,1860
F. philomiragia
    O#319lEFTNN1CP010019Finished2,017,4000
    O#319-067EFTNN4CP009436CP009437Finished2,049,7111
    O#319-036EFTNN3CP009442CP009443Finished1,924,0611
    O#319-029EFTNN2CP009342CP009343Finished2,044,9341
    GA01-2801EFTNN6CP009444CP009446Finished2,033,7142
    GA01-2794EFTNN5CP009440CP009441Finished2,152,0541
  • a I, inclusivity strain; E, exclusivity strain.

  • b AOAC, Association of Analytical Communities.

  • c Quality refers to the quality of the genome assembly, as defined by Chain et al (6). The number of contigs for the IHQD assembly is listed in parentheses.