TABLE 1

Summary of genome sequencing for the 11 H. influenzae isolates in the present study

IsolateSourceBioSample no.STaAccession no.Genome coverage (×)Genome size (Mb)No. of contigsNo. of genes
MiHi64Nasopharyngeal carriageSAMN0328498034JXMG00000000531.981091,986
Hi345BloodSAMN0328497234JXLY00000000711.81221,776
Hi359BloodSAMN03284973103JXLZ00000000601.86301,847
Hi378CSFbSAMN03284975103JXMB00000000481.92261,909
RMHi93Oropharyngeal carriageSAMN03284981105JXMH00000000471.94351,938
Hi322CSFSAMN03284971105JXLX00000000831.91331,925
MiHi270Nasopharyngeal carriageSAMN03284979139JXMF00000000601.84261,812
Hi361BloodSAMN03284974139JXMA00000000501.84211,805
Hi381CSFSAMN03284976139JXMC00000000501.84241,808
Hi394BloodSAMN03284977145JXMD00000000581.90311,898
Hi403CSFSAMN03284978145JXME00000000691.87311,863
  • a ST, sequence type.

  • b CSF, cerebrospinal fluid.