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Genome Sequences

Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh

M. Imranul Hoq, Robiul Hasan Bhuiyan, M. Khondakar Raziur Rahman, Imam Hossen, Sajib Rudra, M. Arif Hossain, Shanta Paul, M. Omer Faruq, Mohammad Omar Faruque, H. M. Abdullah Al Masud
Simon Roux, Editor
M. Imranul Hoq
aDepartment of Microbiology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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Robiul Hasan Bhuiyan
bDepartment of Biochemistry and Molecular Biology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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M. Khondakar Raziur Rahman
cDepartment of Botany, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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Imam Hossen
cDepartment of Botany, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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Sajib Rudra
cDepartment of Botany, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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M. Arif Hossain
cDepartment of Botany, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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Shanta Paul
aDepartment of Microbiology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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M. Omer Faruq
bDepartment of Biochemistry and Molecular Biology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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Mohammad Omar Faruque
cDepartment of Botany, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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H. M. Abdullah Al Masud
aDepartment of Microbiology, Faculty of Biological Sciences, University of Chittagong, Chattogram, Bangladesh
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  • ORCID record for H. M. Abdullah Al Masud
Simon Roux
DOE Joint Genome Institute
Roles: Editor
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DOI: 10.1128/MRA.00189-21
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    FIG 1

    Phylogenetic tree of a SARS-CoV-2 strain from the Khagrachari District of Bangladesh. The tree was constructed on 19 February 2021 using the Nextcladebeta version 0.13.0 (clades.nextstrain.org), in which the red circle represents the position of hCoV-19/Bangladesh/CU-CTG-24/2020 (GISAID accession no. EPI_ISL_735496).

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  • TABLE 1

    Mutations observed in hCoV-19/Bangladesh/CU-CTG-24/2020 compared with SARS-CoV-2 isolate Wuhan-Hu-1a

    TABLE 1
    • ↵a GenBank accession no. NC_045512.2.

    • ↵b UTR, untranslated region.

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Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh
M. Imranul Hoq, Robiul Hasan Bhuiyan, M. Khondakar Raziur Rahman, Imam Hossen, Sajib Rudra, M. Arif Hossain, Shanta Paul, M. Omer Faruq, Mohammad Omar Faruque, H. M. Abdullah Al Masud
Microbiology Resource Announcements Apr 2021, 10 (13) e00189-21; DOI: 10.1128/MRA.00189-21

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Genome Sequence of a SARS-CoV-2 Strain from a COVID-19 Clinical Sample from the Khagrachari District of Bangladesh
M. Imranul Hoq, Robiul Hasan Bhuiyan, M. Khondakar Raziur Rahman, Imam Hossen, Sajib Rudra, M. Arif Hossain, Shanta Paul, M. Omer Faruq, Mohammad Omar Faruque, H. M. Abdullah Al Masud
Microbiology Resource Announcements Apr 2021, 10 (13) e00189-21; DOI: 10.1128/MRA.00189-21
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