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Omics Data Sets

  • Open Access
    Metagenomic Analysis of Samples from Three Bat Species Collected in the Amazon Rain Forest
    Omics Data Sets
    Metagenomic Analysis of Samples from Three Bat Species Collected in the Amazon Rain Forest

    We report here the sequencing of five microbiome samples collected from different bat species in the Amazon rain forest. All contigs matching virus sequences were assigned to members of the Retroviridae family, while the bacterial contigs matched several bacterial species mostly belonging to the Proteobacteria phylum.

    Luciano Chaves Franco Filho, Rafael Ribeiro Barata, Jedson Ferreira Cardoso, Janaina Mota de Vasconcelos Massafra, Poliana da Silva Lemos, Livia Medeiros Neves Casseb, Ana Cecilia Ribeiro Cruz, Marcio Roberto Teixeira Nunes
  • Open Access
    16S rRNA Amplicon Sequencing of Seawater Microbiota from Quintero Bay, Chile, Affected by Oil Spills, Shows the Presence of an Oil-Degrading Marine Bacterial Guild Structured by the Bacterial Genera <em>Alcanivorax, Cobetia, Halomonas</em>, and <em>Oleiphilus</em>
    Omics Data Sets
    16S rRNA Amplicon Sequencing of Seawater Microbiota from Quintero Bay, Chile, Affected by Oil Spills, Shows the Presence of an Oil-Degrading Marine Bacterial Guild Structured by the Bacterial Genera Alcanivorax, Cobetia, Halomonas, and Oleiphilus

    The Quintero Bay, located along the central coast of Chile, has suffered different oil spills during the past 5 years, impacting marine ecosystems. This report describes the microbial community structure of seawater samples obtained from the Quintero Bay through 16S rRNA amplicon sequencing.

    Claudia Ibacache-Quiroga, Juan Ojeda, M. Alejandro Dinamarca
  • Open Access
    Multispecies Transcriptomics Data Set of <span class="named-content genus-species" id="named-content-1">Brugia malayi</span>, Its <em>Wolbachia</em> Endosymbiont <em>w</em>Bm, and <span class="named-content genus-species" id="named-content-2">Aedes aegypti</span> across the <span class="named-content genus-species" id="named-content-3">B. malayi</span> Life Cycle
    Omics Data Sets
    Multispecies Transcriptomics Data Set of Brugia malayi, Its Wolbachia Endosymbiont wBm, and Aedes aegypti across the B. malayi Life Cycle

    Here, we present a comprehensive transcriptomics data set of Brugia malayi, its Wolbachia endosymbiont wBm, and its vector host. This study samples from 16 stages across the entire B. malayi life cycle, including stage 1...

    Matthew Chung, Laura Teigen, Silvia Libro, Robin E. Bromley, Nikhil Kumar, Lisa Sadzewicz, Luke J. Tallon, Jeremy M. Foster, Michelle L. Michalski, Julie C. Dunning Hotopp
  • Open Access
    Fecal Metagenome Sequences from Lactating Dairy Cows Shedding <span class="named-content genus-species" id="named-content-1">Escherichia coli</span> O157:H7
    Omics Data Sets
    Fecal Metagenome Sequences from Lactating Dairy Cows Shedding Escherichia coli O157:H7

    Cattle are primary reservoirs of Escherichia coli O157:H7, a causative agent of severe human infections. To facilitate analyses of the communities in which this pathogen is found, we sequenced the fecal metagenomes of 10 dairy cows shedding E. coli O157:H7 and added them to the public domain.

    ...
    Serajus Salaheen, Seon Woo Kim, Jeffrey S. Karns, Bradd J. Haley, Jo Ann S. Van Kessel
  • Open Access
    A Divergent Strain of <span class="named-content genus-species" id="named-content-1">Culex pipiens</span>-Associated Tunisia Virus in the Malaria Vector <span class="named-content genus-species" id="named-content-2">Anopheles epiroticus</span>
    Omics Data Sets
    A Divergent Strain of Culex pipiens-Associated Tunisia Virus in the Malaria Vector Anopheles epiroticus

    Here, we report the draft genome sequence of a divergent strain of Culex pipiens-associated Tunisia virus (CpATV) identified in the malaria vector Anopheles epiroticus (CpATV-AnE). CpATV-AnE expands the reference virus sequence, introducing an extended replicase with novel virga-like domains.

    ...
    Humberto J. Debat, José M. C. Ribeiro
  • Open Access
    Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico “Dead Zone”
    Omics Data Sets
    Metagenomic Assembly and Prokaryotic Metagenome-Assembled Genome Sequences from the Northern Gulf of Mexico “Dead Zone”
    J. Cameron Thrash, Brett J. Baker, Kiley W. Seitz, Ben Temperton, Lauren Gillies Campbell, Nancy N. Rabalais, Bernard Henrissat, Olivia U. Mason

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