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Genome Sequences

  • Open Access
    Complete Genome Sequence of <em>Francisella</em> sp. Strain LA11-2445 (FDC406), a Novel <em>Francisella</em> Species Isolated from a Human Skin Lesion
    Genome Sequences
    Complete Genome Sequence of Francisella sp. Strain LA11-2445 (FDC406), a Novel Francisella Species Isolated from a Human Skin Lesion

    Here, we present the 2,139,666-bp circular chromosome of Francisella sp. strain LA11-2445 (FDC406), a proposed novel species of Francisella that was isolated from a human cutaneous lesion and is related to Francisella species from marine environments.

    Caroline Öhrman, Ingrid Uneklint, Linda Karlsson, Laurel Respicio-Kingry, Mats Forsman, Jeannine M. Petersen, Andreas Sjödin
  • Open Access
    Draft Genome Sequences of <span class="named-content genus-species" id="named-content-1">Thelohania contejeani</span> and <span class="named-content genus-species" id="named-content-2">Cucumispora dikerogammari</span>, Pathogenic Microsporidia of Freshwater Crustaceans
    Genome Sequences
    Draft Genome Sequences of Thelohania contejeani and Cucumispora dikerogammari, Pathogenic Microsporidia of Freshwater Crustaceans

    We announce the draft genome sequences of two pathogenic microsporidia of European freshwater crustaceans, Thelohania contejeani (the causative agent of porcelain disease) and Cucumispora dikerogammari. Both species are implicated in mass mortalities in natural populations of their crayfish and...

    Alexandre Cormier, Rémi Wattier, Isabelle Giraud, Maria Teixeira, Frédéric Grandjean, Thierry Rigaud, Richard Cordaux
  • Open Access
    Complete Genome Sequence of Neonatal Clinical Group B Streptococcal Isolate CJB111
    Genome Sequences
    Complete Genome Sequence of Neonatal Clinical Group B Streptococcal Isolate CJB111

    Group B Streptococcus (GBS) is an asymptomatic colonizer of the female reproductive tract but can cause maternal and neonatal infections and adverse pregnancy outcomes. Here, we closed the genome sequence of strain CJB111, a neonatal GBS clinical isolate from a case of late-onset bacteremia without focus (Houston, TX; 1990).

    Brady L. Spencer, Anushila Chatterjee, Breck A. Duerkop, Carol J. Baker, Kelly S. Doran
  • Open Access
    Genome Sequences of Two Marsupial Simplex Viruses, Macropodid Alphaherpesviruses 2 and 4
    Genome Sequences
    Genome Sequences of Two Marsupial Simplex Viruses, Macropodid Alphaherpesviruses 2 and 4

    We present the genome sequences of macropodid alphaherpesviruses 2 and 4, two closely related pathogens of macropods. Both encoded 68 nonredundant open reading frames (ORFs) and share 90.6% genome-wide nucleotide identity. These viruses are associated with fatal outbreaks of disease in multiple marsupial species. These sequences will be important for the development of new diagnostic tools.

    P. K. Vaz, T. J. Mahony, C. A. Hartley, J. Motha, J. M. Devlin
  • Open Access
    BK Polyomavirus Genotypes in Two Patients after Hematopoietic Cell Transplant
    Genome Sequences
    BK Polyomavirus Genotypes in Two Patients after Hematopoietic Cell Transplant

    BK polyomavirus (BKPyV) infection can lead to nephropathy and hemorrhagic cystitis (HC). We evaluated BKPyV genotypes in two individuals after hematopoietic cell transplant (HCT). The first case developed HC and was infected with genotype Ib-2, while the second did not develop HC and was infected with genotype Ia.

    Elizabeth A. Odegard, Heidi L. Meeds, Steven B. Kleiboeker, Assem Ziady, Anthony Sabulski, Sonata Jodele, Stella M. Davies, Benjamin L. Laskin, Jason T. Blackard
  • Open Access
    Draft Genome Sequence of Multidrug-Resistant <span class="named-content genus-species" id="named-content-1">Pseudomonas protegens</span> Strain 11HC2, Isolated from Marine Plastic Collected from the West Coast of Norway
    Genome Sequences
    Draft Genome Sequence of Multidrug-Resistant Pseudomonas protegens Strain 11HC2, Isolated from Marine Plastic Collected from the West Coast of Norway

    We report the draft genome sequence of the multidrug-resistant Pseudomonas protegens strain 11HC2, isolated from polypropylene collected from a water column near a beach in Øygarden, Norway. The genome sequence is 6,861,219 bp in length, with a G+C content of 63.4%. Strain 11HC2 is resistant to cefotaxime, ampicillin, trimethoprim, and chloramphenicol.

    ...
    Vera Radisic, Bjørn Tore Lunestad, Monica Sanden, Michael S. Bank, Nachiket P. Marathe
  • Open Access
    Complete Genome Sequence of <span class="named-content genus-species" id="named-content-1">Alistipes indistinctus</span> Strain 2BBH45, Isolated from the Feces of a Healthy Japanese Male
    Genome Sequences
    Complete Genome Sequence of Alistipes indistinctus Strain 2BBH45, Isolated from the Feces of a Healthy Japanese Male

    The genus Alistipes is one of the members of the human gut microbiota. Here, we report the complete genome sequence of Alistipes indistinctus strain 2BBH45, harboring plasmid p2BBH45.

    Yusuke Ogata, Mitsuo Sakamoto, Moriya Ohkuma, Masahira Hattori, Wataru Suda
  • Open Access
    Genome Sequence of <span class="named-content genus-species" id="named-content-1">Mycobacterium abscessus</span> Phage phiT46-1
    Genome Sequences
    Genome Sequence of Mycobacterium abscessus Phage phiT46-1

    Mycobacteriophage phiT46-1 is a newly isolated Mycobacterium phage that was isolated by spontaneous release from Mycobacterium abscessus strain Taiwan-46 and infects M. abscessus strain BWH-C. Phage phiT46-1 is unrelated to previously described mycobacteriophages, has a 52,849-bp genome,...

    Elizabeth D. Amarh, Rebekah M. Dedrick, Rebecca A. Garlena, Daniel A. Russell, Deborah Jacobs-Sera, Graham F. Hatfull
  • Open Access
    Draft Genome Sequence of <em>Cytophagales</em> sp. Strain WSM2-2, Isolated from Garden Soil
    Genome Sequences
    Draft Genome Sequence of Cytophagales sp. Strain WSM2-2, Isolated from Garden Soil

    We report the draft genome sequence of the Cytophagales sp. strain WSM2-2, isolated from garden soil. A 5.5-Mb genome sequence comprising four contigs was successfully obtained using Illumina NovaSeq and MinION sequencers. This draft genome sequence will contribute to the genomic knowledge of the bacterial order Cytophagales.

    Masataka Aoki, Mamoru Oshiki, Mizuki Iwagaki, Masashi Hatamoto, Takashi Yamaguchi, Nobuo Araki
  • Open Access
    Complete Genome Sequence of <em>Halomonas</em> sp. Strain SH5A2, a Dye-Degrading Halotolerant Bacterium Isolated from the Salinas and Aguada Blanca National Reserve in Peru
    Genome Sequences
    Complete Genome Sequence of Halomonas sp. Strain SH5A2, a Dye-Degrading Halotolerant Bacterium Isolated from the Salinas and Aguada Blanca National Reserve in Peru

    Halomonas sp. strain SH5A2 is a halotolerant bacterium isolated from Salinas Lake at 4,300 m above sea level in Peru. Here, we report its complete genome sequence with a length of 3,849,224 bp and highlight the presence of genes putatively related to dye degradation, such as NADPH-dependent oxidoreductases.

    Walter F. Manya, Wendy C. Lizárraga, Carlo G. Mormontoy, Mario A. Taira, Pablo S. Ramírez

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